Adjusting the AMM takes time. I built a little test light the other day and monkeyed around, and it seems to take a few seconds and up to a minute for the computer to react to the new AMM setting. Adjust slowly, my son.
And Benson, you could have a few other troubles. I had a fuel pressure regulator that was fine off boost, but gave rediculously high pressures in boost. I'm not sure why that would be, since a failure is generally a failure. Ian also had a rich running problem that turned out to be the one-way valve, though now that I think about it I'm not sure how that could be...
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My question to you folk who've done the browntop / 2.2 swap is this: How badly was your ignition timing affected? Assuming the AMM signal controls the ignition timing as well as the fuel trim, adding a resistor inline with the AMM signal line should also tell the ICM that less air is entering the engine, which should call for a bit more advance. Granted you can dial out a bit of static timing at the distributor and hopefully end up at the same place under load, but this also effectively lowers the cruise timing and should therefore affect fuel economy.
The other question I have is: What about extreme cold starting? I imagine the AMM is ignored during cranking, so no matter what tricks you've performed on the AMM signal, during cranking things are going to be quite a bit richer. Knowing Megasquirt and extreme winters like I do, I know that the car is relatively insensitive to excess fuel during cranking and is difficult to flood, but it can be done.
My plan is to install small CFI injectors (similar to browntops) and a 4 bar regulator along with a Fredchip, and drive it all year 'round. If this is not going to work, I'd prefer to know ahead of time and sell the chip, trade the injectors for something bigger, and run 'squirt. Obviously the 2.4 guys can leave their experiences out of this, since it's a completely different animal.